bio-metagenomics-abundance

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Species abundance estimation using Bracken with Kraken2 output. Redistributes reads from higher taxonomic levels to species for more accurate estimates. Use when accurate species-level abundances are needed from Kraken2 classification output.

By tools-only schedule Updated 2/4/2026

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Install via CLI

npx skills add https://github.com/tools-only/X-Skills --skill bio-metagenomics-abundance

Repository Details

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Occupations

Microbiologists