mmc

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Compile today's or a specified daily capture into the Vault Architecture v2 structure. Runs a three-stage EXTRACT -> TRANSFORM -> LOAD pipeline that updates concepts, atlas MOCs, synthesis pages, the root index, build log, manifest, state, session bootstrap context, and auto-archive folds.

s-gryt By s-gryt schedule Updated 6/5/2026

name: mmc description: > Compile today's or a specified daily capture into the Vault Architecture v2 structure. Runs a three-stage EXTRACT -> TRANSFORM -> LOAD pipeline that updates concepts, atlas MOCs, synthesis pages, the root index, build log, manifest, state, session bootstrap context, and auto-archive folds. argument-hint: "[YYYY-MM-DD|raw-folder-path|--all]" allowed-tools: "Read Write Edit Glob Grep Bash(obsidian *)"

Objective

Compile one raw daily capture into the Vault Architecture v2 knowledge base.

This command is operational only. Do not write /mmc, /memory-mason:mmc, or their execution chatter back into the vault.

Path Resolution

Before any other reasoning, resolve vault config in this priority order:

  1. Project ./.env
  2. Project ./memory-mason.json
  3. Global ~/.memory-mason/.env
  4. Global ~/.memory-mason/config.json

Resolve:

  • {vault}: absolute path to the Obsidian vault
  • {subfolder}: plugin-managed subfolder inside the vault

Use the source that provides the vault path.

Subfolder rules:

  • If the vault path comes from an .env file, use MEMORY_MASON_SUBFOLDER from that same file when present, otherwise default to ai-knowledge.
  • If the vault path comes from memory-mason.json or ~/.memory-mason/config.json, use its subfolder.

Do not claim config is missing until you have attempted all four locations above. If none provide a vault path, fail fast with an explicit error that names every location checked.

Project Isolation

Each subfolder is a self-contained project boundary. Strict rules:

  1. Read only from {vault}/{subfolder}/ — never glob, read, or reference files in sibling subfolders.
  2. Link only within {vault}/{subfolder}/ — every wikilink in article bodies, index rows, and log entries must start with {subfolder}/ so Obsidian resolves within the correct project regardless of vault-wide link settings.
  3. Create pages only inside {vault}/{subfolder}/ — concepts, atlas, synthesis, index, and meta files all live under the configured subfolder.
  4. Related section constraint — only add [[{subfolder}/concepts/slug]] links to concepts that were confirmed to exist in {vault}/{subfolder}/concepts/ during this compile. Never link to concepts you know exist in other subfolders.

Use these paths for all operations:

  • Raw captures: {vault}/{subfolder}/_raw/
  • Raw day folder: {vault}/{subfolder}/_raw/{YYYY-MM-DD}/
  • Raw day metadata: {vault}/{subfolder}/_raw/{YYYY-MM-DD}/meta.json
  • Meta root: {vault}/{subfolder}/_meta/
  • State file: {vault}/{subfolder}/_meta/state.json
  • Manifest file: {vault}/{subfolder}/_meta/manifest.json
  • Build log: {vault}/{subfolder}/_meta/log.md
  • Fold archive: {vault}/{subfolder}/_meta/folds/
  • Session context: {vault}/{subfolder}/_meta/context.md
  • Taxonomy: {vault}/{subfolder}/_meta/taxonomy.md
  • Atlas: {vault}/{subfolder}/atlas/
  • Atlas home: {vault}/{subfolder}/atlas/home.md
  • Concepts: {vault}/{subfolder}/concepts/
  • Synthesis: {vault}/{subfolder}/synthesis/
  • Index: {vault}/{subfolder}/index.md

Pipeline

0. Resolve the target raw capture

  • If the argument is --all, enter batch mode: read _meta/state.json ingested map, glob all date folders under _raw/, identify every folder not present in the ingested map (or whose hash changed), and process each in chronological order. Run the full EXTRACT → TRANSFORM → LOAD pipeline for each date. Report per-day results. After all days complete, run a final TRANSFORM pass across the full concept set to ensure atlas/synthesis pages reflect the complete corpus.
  • If no argument was provided, target today's local date folder: {vault}/{subfolder}/_raw/{YYYY-MM-DD}/.
  • If the argument matches YYYY-MM-DD, use that date folder under _raw/.
  • If the argument is a folder path, normalize it and require that it resolves inside {vault}/{subfolder}/_raw/.
  • Derive sourceKey as the date folder name YYYY-MM-DD.
  • Read chunk files matching ^[0-9]{3}\.md$ in numeric order: 001.md, 002.md, and so on.
  • Read meta.json if present for operational metadata only. Do not treat meta.json as narrative source text.
  • If the target folder does not exist, or no numeric chunk files exist, fail fast with an explicit error that names the path checked.
  • Concatenate chunk contents in numeric order with a single blank line between chunks. Use this exact concatenation for parsing and hashing.
  • Compute a 16-character SHA-256 hex hash for the concatenated source text.
  • If {vault}/{subfolder}/_meta/manifest.json already contains sourceKey with the same hash, and the user did not explicitly request recompilation, stop and report Already compiled (unchanged).

1. EXTRACT

  • Read {vault}/{subfolder}/index.md if it exists. If it does not exist, start with an empty catalog state.
  • Read {vault}/{subfolder}/_meta/taxonomy.md if it exists. Use it to normalize tags, aliases, and tag slugs before creating or updating pages.
  • Glob all files in {vault}/{subfolder}/concepts/.
  • Read frontmatter and lead sections of every existing concept page to build a duplicate-detection map by slug, title, aliases, and tags.
  • Fully read any existing concept whose slug, title, aliases, or tags overlap a candidate concept before deciding whether to create or update.
  • Extract only durable knowledge from the raw chunks: decisions, patterns, terminology, workflows, invariants, constraints, and recurring lessons.
  • Prefer updating an existing concept over creating a near-duplicate.
  • Do not hallucinate novelty. If a fact is already present in an existing concept, merge or refine it only when the raw chunks add new evidence, better wording, or changed status.

For every concept page, use this exact frontmatter schema:

---
title: "Concept Name"
type: concept
status: seedling
confidence: medium
aliases: []
tags: []
sources:
  - "_raw/2026-05-04/001.md"
created: 2026-05-04
updated: 2026-05-04
---

Concept status rules:

  • New concept pages always start as seedling.
  • Promote to growing when the concept has 3 or more unique sources entries.
  • Promote to evergreen when at least one synthesis page links to the concept.
  • evergreen overrides growing, and growing overrides seedling.
  • Never promote status without the required evidence.

Confidence rules:

  • low: weakly supported, inferred, or only briefly mentioned.
  • medium: directly supported by the current raw capture or one durable prior source.
  • high: corroborated by multiple sources or expressed as an explicit stable decision.

Concept page body format (frontmatter omitted here because the schema above is authoritative):

# Concept Name

[2-4 sentence core explanation]

## Key Points

- [Self-contained point]
- [Self-contained point]
- [Self-contained point]

## Details

[Encyclopedia-style paragraph]

[Second encyclopedia-style paragraph]

## Related

- [[{subfolder}/concepts/related-concept]] - [How it relates]
- [[{subfolder}/atlas/topic-slug]] - [Parent topic map]
  • Keep source provenance in frontmatter only. Do not add a separate ## Sources section to concept pages.

Concept update rules:

  • Preserve the original created date.
  • Update updated on every material change.
  • Merge and deduplicate aliases, tags, and sources.
  • Recompute status and confidence after merging sources.
  • Preserve the article's established scope. Do not rewrite it into a different concept just because the new source uses slightly different words.

Contradiction detection during updates:

  • Before merging new claims into an existing concept, compare the new raw evidence against the existing ## Key Points.
  • If the new evidence directly contradicts an existing key point (a decision reversed, a tool replaced, an approach abandoned), do not silently overwrite the original point.
  • Add a callout below the contradicted key point:

[!contradiction] Session _raw/2026-05-05/001.md states Y, but existing evidence from _raw/2026-05-01/002.md says X.

  • Keep both the original key point and the new one so the user can resolve the conflict.
  • Concepts with unresolved [!contradiction] callouts must not be promoted to evergreen.
  • If the contradiction is clearly a supersession (newer decision explicitly replaces older), update the key point and add a note callout instead: > [!note] Superseded: previously X (see _raw/2026-05-01/002.md), now Y.

Gap flagging for thin concepts:

  • When creating a new concept page where confidence: low and the ## Key Points section has fewer than 3 items, append a callout at the end of the ## Details section:

[!gap] Sparse capture — this concept was only briefly mentioned. Awaiting future sessions for enrichment.

  • Do not add gap callouts to concepts with confidence: medium or high.
  • Remove existing gap callouts when a concept is updated with sufficient evidence (3+ key points or confidence promoted to medium or higher).

2. TRANSFORM

  • Scan the full concept set within {vault}/{subfolder}/ after EXTRACT, not just pages touched in this run. Never read concepts from sibling subfolders.
  • Use normalized tags from the concept corpus as the primary grouping mechanism.
  • Generate or update atlas MOCs and synthesis pages only from evidence already present in concept pages and raw sources.
  • When creating or updating any concept, scan existing concepts within {vault}/{subfolder}/concepts/ for shared tags. Add [[{subfolder}/concepts/related-slug]] entries in the ## Related section for concepts that share 2 or more tags. Target 3-5 outbound wikilinks per concept page. Only link to concepts confirmed to exist in the current subfolder.

MOC generation rule:

  • If 5 or more concept pages share the same normalized tag, create or update {vault}/{subfolder}/atlas/{tag-slug}.md.
  • One tag = one MOC file.
  • Do not create a tag MOC for fewer than 5 concepts.

Sparse MOC rule:

  • If 2-4 concept pages share the same normalized tag, create or update {vault}/{subfolder}/atlas/{tag-slug}-sparse.md.
  • Use the same atlas page format as a regular MOC page but set status: sparse in the frontmatter.
  • Do not create a sparse MOC when a regular MOC already exists for the same tag.
  • Sparse MOCs are upgraded to regular MOCs automatically when the tag reaches 5 concepts; at that point, rename the file from {tag-slug}-sparse.md to {tag-slug}.md and remove the status: sparse field.

Atlas page format:

---
title: "Tag Name"
type: moc
tag: tag-slug
created: 2026-05-04
updated: 2026-05-04
---

# Tag Name

## Summary

[1 short paragraph describing what this tag collects]

## Concepts

- [[{subfolder}/concepts/concept-a]] - [One-line summary]
- [[{subfolder}/concepts/concept-b]] - [One-line summary]

## Related Synthesis

- [[{subfolder}/synthesis/tag-slug]] - [Only if a synthesis page exists]

## Related Tags

- [[{subfolder}/atlas/another-tag]] - [Only when genuinely related]

Synthesis generation rule:

  • Create or update {vault}/{subfolder}/synthesis/{tag-slug}.md only when all of the following are true:
    • At least 3 concept pages share the same normalized tag.
    • Those concepts draw from 3 or more different daily dates.
    • The material supports a non-obvious cross-cutting pattern, such as a repeated tradeoff, failure mode, design heuristic, invariant, or adoption pattern.
  • Do not create synthesis pages for simple topical grouping or restated tag summaries.
  • If no non-obvious pattern is present, skip synthesis creation for that tag.

Synthesis page format:

---
title: "Synthesis: Tag Name"
type: synthesis
tag: tag-slug
concepts:
  - "concepts/concept-a"
  - "concepts/concept-b"
sources:
  - "_raw/2026-05-01/001.md"
  - "_raw/2026-05-03/002.md"
  - "_raw/2026-05-04/001.md"
created: 2026-05-04
updated: 2026-05-04
---

# Synthesis: Tag Name

## Pattern

[State the non-obvious cross-cutting pattern in 1-2 paragraphs]

## Evidence

- [[{subfolder}/concepts/concept-a]] - [Evidence]
- [[{subfolder}/concepts/concept-b]] - [Evidence]
- [[{subfolder}/concepts/concept-c]] - [Evidence]

## Implications

- [Reusable lesson]
- [Constraint or tradeoff]
- [Follow-up question or operational consequence]

Maturity promotion during TRANSFORM:

  • After a synthesis page is created or updated, mark each cited concept as evergreen only if it has no unresolved [!contradiction] callouts.
  • If a cited concept still has unresolved contradictions, do not promote it beyond its source-based status (seedling or growing) until the contradiction is resolved.
  • Re-save those concept pages with updated frontmatter and updated dates if their status changed.

Home MOC rule:

  • Always create or update {vault}/{subfolder}/atlas/home.md on every successful /mmc run.
  • atlas/home.md must include current vault stats and recent activity, even if no tag MOC or synthesis page changed.

Home MOC format:

---
title: "Memory Mason Home"
type: moc
created: 2026-05-04
updated: 2026-05-04
---

# Memory Mason Home

## Vault Stats

- Concepts: [count]
- Synthesis: [count]
- MOCs: [count]
- Last compile: [ISO timestamp]

## Active Tags

- [[{subfolder}/atlas/tag-slug]] - [Concept count for the tag]

## Recently Updated

- [[{subfolder}/concepts/example-concept]]
- [[{subfolder}/synthesis/example-tag]]
- [[{subfolder}/atlas/example-tag]]

3. LOAD

  • Update {vault}/{subfolder}/index.md.
  • The index lives at the vault root, not under a knowledge/ folder.
  • Maintain one row per page for concepts, synthesis pages, and MOCs.
  • Use lowercase type values exactly: concept, synthesis, moc.
  • Every row must include a one-line summary.

Index format:

# Memory Mason Index

| Type | Article | Summary | Updated |
|------|---------|---------|---------|
| concept | [[{subfolder}/concepts/example-concept]] | One-line summary. | 2026-05-04 |
| synthesis | [[{subfolder}/synthesis/example-tag]] | One-line summary. | 2026-05-04 |
| moc | [[{subfolder}/atlas/example-tag]] | One-line summary. | 2026-05-04 |
  • Read {vault}/{subfolder}/_meta/state.json if it exists. Otherwise start with:
{
  "ingested": {},
  "last_compile": null,
  "last_lint": null,
  "capture_metrics": {
    "capture_count": 0,
    "total_raw_chars": 0,
    "total_stored_chars": 0,
    "total_raw_tokens": 0,
    "total_stored_tokens": 0,
    "total_savings_chars": 0,
    "total_savings_tokens": 0,
    "total_savings_percent": 0,
    "last_capture_at": null,
    "last_capture": null
  }
}
  • If state.json already exists, preserve existing keys you are not actively updating, including capture_metrics and total_cost_usd.

  • Set ingested[sourceKey] to:

{
  "hash": "<16-char-hash>",
  "compiled_at": "<ISO-8601 timestamp>",
  "chunk_count": 3
}
  • Set last_compile to the current ISO-8601 timestamp.

  • Write {vault}/{subfolder}/_meta/state.json with 2-space JSON indentation.

  • Read {vault}/{subfolder}/_meta/manifest.json if it exists. Otherwise start with:

{
  "sources": {}
}
  • Set sources[sourceKey] to:
{
  "source_path": "_raw/YYYY-MM-DD/",
  "hash": "<16-char-hash>",
  "compiled_at": "<ISO-8601 timestamp>",
  "chunks": [
    "_raw/YYYY-MM-DD/001.md",
    "_raw/YYYY-MM-DD/002.md"
  ],
  "pages_created": [
    "concepts/example-concept.md",
    "atlas/example-tag.md"
  ],
  "pages_updated": [
    "concepts/another-concept.md",
    "synthesis/example-tag.md",
    "index.md"
  ]
}
  • Merge and deduplicate pages_created and pages_updated if the source key already exists.

  • Preserve all other manifest entries.

  • Write {vault}/{subfolder}/_meta/manifest.json with 2-space JSON indentation.

  • Update {vault}/{subfolder}/_meta/taxonomy.md on every successful compile.

  • Glob all concept pages in {vault}/{subfolder}/concepts/. Collect every unique tag from frontmatter tags: arrays.

  • If taxonomy.md does not exist, create it with all collected tags.

  • If taxonomy.md exists, read it and append any new tags not already listed.

  • Taxonomy format:

---
type: meta
title: "Taxonomy"
updated: 2026-05-04
---

# Taxonomy

| Tag | Canonical | Aliases |
|-----|-----------|---------|
| tag-slug | Tag Name | alias-1, alias-2 |
  • When a concept uses a tag that resembles an existing tag (plural/singular, hyphenation variant), normalize it to the existing canonical form instead of creating a duplicate. Update the concept's frontmatter to use the canonical tag.

  • Append one build entry to {vault}/{subfolder}/_meta/log.md using this format:

## [ISO-timestamp] compile | YYYY-MM-DD
- Source: _raw/YYYY-MM-DD/ ([chunk count] chunks)
- Concepts created: [count]
- Concepts updated: [count]
- Synthesis created: [count]
- Synthesis updated: [count]
- MOCs created: [count]
- MOCs updated: [count]
- Index rows touched: [count]
  • After appending the compile entry, count _meta/log.md entries by ## [ headings.
  • If _meta/log.md has 32 or more entries, auto-fold the oldest 16 entries (k=4) into {vault}/{subfolder}/_meta/folds/{fold-id}.md.
  • Reuse /mma extractive rules for the fold page: no invented facts, preserve verbatim source entries, and summarize only what those entries record.
  • Replace the folded range in _meta/log.md with:
<!-- folded: [[{subfolder}/_meta/folds/{fold-id}]] ({COUNT} entries, {EARLIEST-DATE} to {LATEST-DATE}) -->
  • Append a fold action entry to _meta/log.md after the replacement:
## [ISO-timestamp] fold | {fold-id}
- Entries folded: {COUNT} ({EARLIEST-DATE} to {LATEST-DATE})
- Fold page: [[{subfolder}/_meta/folds/{fold-id}]]
  • Report the fold action in /mmc output whenever auto-archive runs.

  • If the newly compiled context body (excluding YAML frontmatter) is fewer than 80 words, append the new content below the existing context.md body rather than replacing it. Still update the updated timestamp in frontmatter. When appending, add a horizontal rule separator. When the new content is 80 words or more, overwrite as normal.

  • Keep the body under 300 words.

  • context.md must summarize only current focus, open decisions, and active threads that are still relevant after this compile.

  • Do not append old context verbatim. Carry forward only unresolved threads that are still grounded in the latest compiled knowledge.

context.md format:

---
type: meta
title: "Session Context"
updated: 2026-05-04T12:34:56Z
---

## Current Focus

[Short paragraph]

## Open Decisions

- [Decision still unresolved]

## Active Threads

- [Thread still active]

Writing Guidelines

  • Write in encyclopedia style: factual, clear, and self-contained.
  • Use Obsidian wikilinks without .md extensions in article bodies.
  • Keep filenames lowercase with hyphens for slugs.
  • Use raw chunk paths like _raw/YYYY-MM-DD/001.md for source provenance.
  • Preserve existing article intent and scope when updating.
  • Prefer fewer precise pages over noisy page proliferation.
  • Never invent facts that are not grounded in raw chunks or already-existing concept pages.
  • Finish only when EXTRACT, TRANSFORM, and LOAD outputs are internally consistent with each other.

Wikilink Convention

Every [[wikilink]] in article bodies must include the {subfolder}/ prefix followed by the full directory-prefixed path. This ensures Obsidian resolves links within the correct project when multiple subfolders share a vault.

Target type Correct Wrong
Concept [[{subfolder}/concepts/hook-system-architecture]] [[concepts/hook-system-architecture]]
Synthesis [[{subfolder}/synthesis/hook-architecture-and-wiring]] [[synthesis/hook-architecture-and-wiring]]
Atlas MOC [[{subfolder}/atlas/hooks]] [[atlas/hooks]]
Raw source (body) [[{subfolder}/_raw/2026-05-04/001]] [[_raw/2026-05-04/001]]
Meta fold [[{subfolder}/_meta/folds/fold-id]] [[_meta/folds/fold-id]]
  • YAML sources: arrays use plain string paths like "_raw/2026-05-04/001.md", not wikilink brackets. These do not need the subfolder prefix.
  • Always prepend {subfolder}/ to every wikilink. Without it, Obsidian may resolve links to pages in sibling subfolders that share the same slug.
  • The same slug can exist in multiple content directories and in multiple subfolders. The {subfolder}/ prefix plus explicit directory makes every link unambiguous.
  • The ## Related section in concept pages must link to [[{subfolder}/concepts/slug]], not [[concepts/slug]] or [[slug]].
  • Index table rows must use [[{subfolder}/concepts/slug]], [[{subfolder}/synthesis/slug]], and [[{subfolder}/atlas/slug]].
Install via CLI
npx skills add https://github.com/s-gryt/memory-mason --skill mmc
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