chematagent-drug-discovery

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Chemical Lab Agent

mdbabumiamssm By mdbabumiamssm schedule Updated 2/10/2026

name: chematagent-drug-discovery description: Chemical Lab Agent keywords: - chemistry - drug-discovery - tools - synthesis - property-prediction measurable_outcome: Plan a synthesis route and predict ADMET properties for a candidate molecule with >80% validity. license: MIT metadata: author: CheMatAgent Team version: "1.0.0" compatibility: - system: Python 3.9+ allowed-tools: - run_shell_command - read_file

CheMatAgent

A two-tiered agent system with access to 137 Python-wrapped chemical tools for drug discovery and materials science.

When to Use

  • Molecule Design: Generating novel structures with specific properties.
  • Property Prediction: Estimating solubility, toxicity, and bioactivity.
  • Synthesis Planning: Designing retro-synthetic routes.

Core Capabilities

  1. Tool Orchestration: Manages a library of 137 chemical tools.
  2. Multi-Scale Modeling: Bridges quantum mechanics and molecular dynamics.
  3. Lab Automation: Generates instructions for robotic synthesis platforms.

Workflow

  1. Goal: Define target property (e.g., "LogP < 5").
  2. Design: Generate candidates.
  3. Filter: Use property prediction tools.
  4. Plan: Output synthesis recipe.

Example Usage

User: "Design a molecule similar to Aspirin but with higher solubility."

Agent Action:

python -m chematagent.design --scaffold "Aspirin" --objective "maximize solubility"
Install via CLI
npx skills add https://github.com/mdbabumiamssm/LLMs-Universal-Life-Science-and-Clinical-Skills- --skill chematagent-drug-discovery
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