snyk-security

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Run generic security vulnerability scans and code quality checks using Snyk MCP server integration. Works across any project type, language, or framework.

dpalfery By dpalfery schedule Updated 3/10/2026

name: snyk-security description: Run generic security vulnerability scans and code quality checks using Snyk MCP server integration. Works across any project type, language, or framework.

Snyk Security Scanning

Goal: Run automated security scans on any project using Snyk's MCP server tools.

Trigger: When you are asked to:

  • "Run security scan"
  • "Check for vulnerabilities"
  • "Audit code for security issues"
  • "Scan dependencies"
  • "Review infrastructure security"

MCP Server Lifecycle Management

The Snyk MCP server is disabled by default to reduce context bloat. This skill follows this lifecycle:

Step 1: Enable Snyk MCP Server (REQUIRED FIRST STEP)

  1. Read .factory/.mcp.json file
  2. Update the "snyk" server section: set "disabled": false
  3. Write the updated configuration back to .factory/.mcp.json

This enables the Snyk MCP server and makes Snyk tools available for use.

"snyk": {
    "type": "stdio",
    "command": "npx",
    "args": ["-y", "snyk@latest", "mcp", "-t", "stdio"],
    "disabled": false  // Enable for scanning
}

Step 2: Execute Scans

After enabling the MCP server, proceed with scanning based on the detected project type (see below).

Step 3: Disable Snyk MCP Server (REQUIRED FINAL STEP)

  1. Read .factory/.mcp.json file
  2. Update the "snyk" server section: set "disabled": true
  3. Write the updated configuration back to .factory/.mcp.json

This removes Snyk tools from context when not needed.


Project Detection & Scanning

The skill automatically detects project type and runs appropriate scans.

Language/Framework Detection

Scan the current directory for these files to identify the project type:

Language/Framework Files to Detect Scan Type
C#/.NET .csproj, .sln snyk_sca_scan
JavaScript/TypeScript package.json, yarn.lock, package-lock.json snyk_sca_scan
Python requirements.txt, pyproject.toml, Pipfile.lock snyk_sca_scan
Java pom.xml, build.gradle snyk_sca_scan
Go go.mod, go.sum snyk_sca_scan
Ruby Gemfile, Gemfile.lock snyk_sca_scan
Rust Cargo.toml, Cargo.lock snyk_sca_scan
PHP composer.json, composer.lock snyk_sca_scan

Infrastructure Detection

Infrastructure Type Files to Detect Scan Type
Terraform *.tf, *.tf.json snyk_iac_scan
CloudFormation *.yaml, *.yml (AWS templates) snyk_iac_scan
Pulumi *.ts (Pulumi projects) snyk_iac_scan
Bicep *.bicep snyk_iac_scan
Kubernetes *.yaml, *.yml (k8s manifests) snyk_iac_scan
Docker Dockerfile, docker-compose.yml snyk_container_scan

Universal Scans (Always Available)

These scans work on any project regardless of language:

  • snyk_code_scan (SAST): Scans source code for security vulnerabilities
  • snyk_sca_scan (SCA): Scans package managers for known vulnerabilities in dependencies
  • snyk_iac_scan (IaC): Scans infrastructure-as-code files for security issues
  • snyk_container_scan (Container): Scans Dockerfiles and container images
  • snyk_sbom_scan (SBOM): Analyzes Software Bill of Materials files if present

Universal Scanning Workflow

Follow this process for any project:

1. Enable MCP Server

  • Read .factory/.mcp.json
  • Update "snyk.disabled": false
  • Write updated configuration

2. Detect Project Type

  • Scan current directory for lock files and config files
  • Identify primary language(s) and frameworks
  • Determine which scan types are relevant

3. Execute Appropriate Scans

  • If dependency files found: Run snyk_sca_scan on detected package managers
  • Always run: snyk_code_scan on source code (if source exists)
  • If IaC files found: Run snyk_iac_scan
  • If Dockerfiles found: Run snyk_container_scan
  • If SBOM files found: Run snyk_sbom_scan

4. Analyze Results

  • Aggregate all scan findings
  • Categorize by severity (Critical, High, Medium, Low)
  • Provide remediation recommendations

5. Disable MCP Server

  • Read .factory/.mcp.json
  • Update "snyk.disabled": true
  • Write updated configuration

6. Report Summary

  • Vulnerability counts by severity
  • Affected packages/files
  • Recommended actions

Remediation Guidance

The skill provides language-agnostic remediation steps:

For Dependency Vulnerabilities (SCA)

  • Update vulnerable packages to safe versions
  • Use the recommended version from Snyk's output
  • Run package manager update command (e.g., npm update, dotnet add package, pip install --upgrade)
  • Re-scan after updating to verify resolution

For Code Issues (SAST)

  • Fix identified security issues in source code
  • Apply patches recommended by Snyk
  • Follow OWASP security best practices
  • Re-scan code after fixing

For Infrastructure Issues (IaC)

  • Update infrastructure-as-code with secure configurations
  • Apply recommended security settings
  • Remove deprecated or insecure features
  • Re-scan after changes

For Container Issues

  • Update base Docker image to secure version
  • Remove vulnerable packages from final image
  • Use multi-stage builds to minimize attack surface
  • Re-scan container image

General Process

  1. Identify vulnerabilities by severity (fix Critical/High first)
  2. Apply recommended fixes
  3. Re-scan the affected component
  4. Verify all issues are resolved
  5. Repeat until no vulnerabilities remain

Compatibility

This skill works with:

  • Codex: Desktop AI coding assistant
  • Factory Droids: Custom agents in .factory/droids/
  • Factory Skills: Can be invoked by other skills
  • Any AI Agent: Through Skill invocation pattern

Example Commands

When invoked, agents may use prompts like:

  • "Run a full security scan on this project"
  • "Check for vulnerabilities in dependencies"
  • "Scan my Dockerfile for security issues"
  • "Audit the infrastructure code"
  • "Generate a security report for this repository"

Important Notes

  • Always enable MCP server before scanning and disable afterward
  • Scans are on-demand only - never run automatically
  • The skill detects project type automatically - don't hardcode project paths
  • Works across any language, framework, or project type
  • Requires Snyk CLI and authentication (handled by MCP server)
  • Results include actionable remediation steps
Install via CLI
npx skills add https://github.com/dpalfery/motorcycle-rag-system --skill snyk-security
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