381,784 Collected SKILL.md files

Explore AI Agent Skills & Claude Prompts

Discover open-source agent skills for Claude Code, Codex, ChatGPT, and any tool that uses SKILL.md.

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soil and plant scientists
Showing 12 of 81 skills
mims-harvard

tooluniverse-plant-genomics

by mims-harvard
star 1.5k

Plant genomics and biology research — PlantReactome pathways, Ensembl Plants gene structure, POWO species taxonomy, UniProt annotation, KEGG plant pathways. Handles polyploidy (wheat hexaploidy etc.) and homeologous gene copies. Use for crop-gene annotation, plant secondary metabolism queries, and plant-disease/stress-response biology.

navigation main article SKILL.md
schedule Updated 13 days ago
zjunlp

scienceworld-environment-isolation

by zjunlp
star 1.0k

Use when you need to isolate a space (like a greenhouse) by closing doors or openings to create a contained environment. Trigger before starting pollination, temperature-sensitive experiments, or other environmental-sensitive tasks that require controlled conditions. Modifies room connectivity to optimize conditions for specific processes.

navigation main article SKILL.md
schedule Updated 3 months ago
aiskillstore

studying-alien-flora

by aiskillstore
star 360

奇异植物 - Stella深入研究盖亚星球的植物生态,发现既美丽又危险的外星植被,并尝试找到可利用的资源

navigation main article SKILL.md
schedule Updated 5 months ago
taomiao

controlled-waiting

by taomiao
star 128

Executes timed waiting to allow processes like plant growth or pollination to progress. Use this skill when you need to advance time for biological or mechanical processes to reach their next stages. This enables progression in tasks that require temporal development rather than immediate actions.

navigation main article SKILL.md
schedule Updated 3 months ago
taomiao

scienceworld-growth-focuser

by taomiao
star 128

This skill applies a 'focus on' action to a specific plant or biological entity to signal intent and monitor its development. It should be triggered after planting or when the agent needs to track the growth stage of a plant (e.g., to observe sprouting, flowering, or reproduction). The skill outputs a confirmation of focus, which may be necessary for triggering or tracking life cycle progression in the environment.

navigation main article SKILL.md
schedule Updated 3 months ago
ComeOnOliver

studying-alien-flora

by ComeOnOliver
star 52

奇异植物 - Stella深入研究盖亚星球的植物生态,发现既美丽又危险的外星植被,并尝试找到可利用的资源

navigation main article SKILL.md
schedule Updated 2 months ago
brycewang-stanford

agsy-data-and-model-evaluation

by brycewang-stanford
star 39

Use when evaluating the model and analyzing results for an Agricultural Systems (AgSy) manuscript so it survives expert systems review — independent model evaluation (observed vs. simulated, fit statistics), sensitivity and uncertainty analysis, and trade-off / scenario analysis across the system. Guides evaluation norms; it does not fabricate results or run the model.

navigation main article SKILL.md
schedule Updated 13 days ago
brycewang-stanford

agsy-figures-and-tables

by brycewang-stanford
star 39

Use when building figures and tables for an Agricultural Systems (AgSy) manuscript so exhibits communicate interactions, dynamics, trade-offs, and model performance clearly. AgSy is a systems journal, so the best exhibits show trade-off frontiers, observed-vs-simulated fit, resource flows, and conceptual system diagrams — not just a bar chart of one treatment. Designs exhibits; it does not run the analysis.

navigation main article SKILL.md
schedule Updated 13 days ago
brycewang-stanford

agsy-impact-and-implications

by brycewang-stanford
star 39

Use when articulating why an Agricultural Systems (AgSy) result matters — its relevance for farm design, management, decision support, or policy. AgSy values systems analysis that informs a decision, so this is what separates an AgSy paper from a methods demo. It frames implications honestly within the model's scope; it does not over-claim or invent impact.

navigation main article SKILL.md
schedule Updated 13 days ago
brycewang-stanford

agsy-literature-positioning

by brycewang-stanford
star 39

Use when positioning an Agricultural Systems (AgSy) manuscript against the literature so it reads as a systems contribution. AgSy readers span agronomy, modelling, livestock, economics, environment, and food-system science, so the paper must engage the systems and modelling literatures they expect — not only one subfield. Stakes the contribution; it does not write the lit review.

navigation main article SKILL.md
schedule Updated 13 days ago
pjt222

fungi-identification

by pjt222
star 21

Field identification of fungi using morphological features, spore prints, habitat analysis, and seasonal context with a safety-first approach. Covers cap, gill, stem, and spore characteristics, look-alike differentiation, toxicity risk assessment, and the critical rule of absolute certainty before consumption. Use when encountering an unknown fungus, foraging for edible mushrooms and needing to confirm species before consumption, assessing whether fungi in a garden or property are harmful, or differentiating an edible species from a dangerous look-alike.

navigation main article SKILL.md
schedule Updated 4 months ago
dvcrn

staghorn-fern-expert

by dvcrn
star 17

Expert guide for Platycerium staghorn ferns — species identification, care advice, and problem diagnosis with scientific backing.

navigation main article SKILL.md
schedule Updated 3 months ago
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Browse Agent Skills by Occupation

23 major groups · 867 SOC occupations

Browse by Category

Explore agent skills organized by their primary use case

SKILLMD / CREATORS AND OCCUPATION CATEGORIES

Explore the agent skills ecosystem by occupation and creator

SkillMD is not just a keyword search box. It is an open map that organizes public skills by occupation, creator, and repository, helping you see which workflows, judgment criteria, and domain habits people are writing for AI agents.

Then follow creators and GitHub repositories back to the source: compare the skills a team maintains, whether the repo is active, and how the README frames the work before you open, install, or reuse anything.

Use it three ways: learn an unfamiliar field by occupation, study how creators organize skills, then use source context to decide what is worth opening or reusing.

01 Map a field

Browse 23 occupation groups and 867 SOC roles to learn what skills exist in adjacent domains and how they break down real work.

02 Follow creators

Use creator and repository pages to inspect maintained skill collections, recent updates, and source context before trusting a result.

03 Search with sources

Search 1.7M+ collected skills, then use occupation tags, creators, and GitHub source context to decide what is worth opening.

Start with the occupation map, then follow creators and repositories back to real code. SkillMD helps explain why a skill is worth opening, not only what it is named.

SEO KNOWLEDGE HUB & TECHNICAL OVERVIEW

Standardizing Agent Capabilities with SKILL.md and Model Context Protocol (MCP)

In the rapidly evolving landscape of artificial intelligence, LLM agents (Large Language Model agents) have transitioned from simple text predictors to autonomous problem solvers. To orchestrate complex, multi-step agentic workflows, developers require a standardized format to specify agent capabilities, prompt instructions, system rules, and database bindings. This is where SKILL.md and the Model Context Protocol (MCP) have emerged as standard developer paradigms. SkillMD serves as the central directory for indexing, exploring, and sharing these critical agent configurations.

Our open-source registry currently tracks over 1.7 million collected SKILL.md configurations and system prompts. By compiling agent configurations from active developers on GitHub, we bridge the gap between prompt engineering research and production execution. Whether you are building agents with Anthropic's Claude Code, OpenAI's GPT-4, Google's Gemini, or local models using Ollama and LlamaIndex, standardized skill definitions ensure your agents behave predictably across different runtime environments.

What is the Model Context Protocol (MCP)?

The Model Context Protocol (MCP) is an open-source standard designed to connect LLMs to data sources, developer tools, and external environments. MCP establishes a bidirectional communication channel between client applications (like Cursor, Claude Desktop, or custom agent systems) and servers hosting data or capabilities. Standardizing instructions via SKILL.md enables LLMs to query databases, read local files, execute terminal commands, and integrate third-party APIs. SkillMD allows you to find ready-to-run MCP servers and prompt instructions for various occupations and technical tasks.

The Structure of a Professional SKILL.md File

A valid SKILL.md configuration is designed to be easily read by humans and parsed by LLMs. It contains precise system instructions, trigger conditions, required parameters, and execution examples. Below is the typical architectural blueprint of a professional agent skill:

  • Metadata & Core Scope: Declares the name of the skill, author details, target models, and a description of the capability.
  • Triggers & Intent Detection: Details semantic triggers that help the agent decide when to invoke this skill.
  • System Prompts: Explicit system-level instructions that direct the agent's behavior, personality, safety guardrails, and formatting preferences.
  • Capabilities & Tools: Lists the files, databases, or APIs the agent must access to complete the tasks.
  • Few-Shot Examples: Demonstrates real inputs and outputs, helping the model generalize behavior through in-context learning.

Optimizing Agent Workflows for Modern LLMs

Writing effective agent skills requires deep knowledge of prompt engineering. With the release of advanced reasoning models like Claude 3.5 Sonnet, ChatGPT o1, and DeepSeek-V3, prompt templates must focus on structured thinking. Developers are encouraged to use XML tags (e.g., <thought>, <context>, and <rules>) to isolate execution boundaries. Standardized prompts prevent agents from suffering from context drift, ensuring that long-running tasks remain aligned with the initial system parameters.

Exploring by SOC Occupations and Creator Profiles

What makes SkillMD unique is its taxonomy. Instead of simple text search, we parse and organize files according to the Standard Occupational Classification (SOC) system. This means you can discover skills written for Computer and Mathematical roles, Business and Financial operations, Legal, Design, and and Educational Instruction fields. By tracking creator profiles, developers can study how different teams organize their custom instructions, compare version updates, and fork public configs for specialized enterprise use cases.

SkillMD operates as a high-performance index running on a fast Go backend and a highly responsive Astro SSR frontend. All search queries execute in milliseconds, featuring smart debouncing to prevent multiple API requests while keeping user data secure. Join our community of developers to standardize your AI agent instructions and optimize your LLM prompting workflows today.

8 QUESTIONS

Frequently Asked Questions

A practical guide to agent skills: what they are, how to inspect them, and how SkillMD helps you explore the ecosystem.