Explore AI Agent Skills & Claude Prompts
Discover open-source agent skills for Claude Code, Codex, ChatGPT, and any tool that uses SKILL.md.
Enter through keywords, occupations, creators, and GitHub sources to see what kinds of skills are emerging across domains.
Use the same catalog through the API
Connect 381,784 public skills to your own search, analytics, or agent workflow with the REST API.
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pharmacogenomics-agent
by FridrichMethodAI-driven pharmacogenomic analysis for precision dosing and adverse event prediction using multi-omics data.
cancer-metabolism-agent
by FridrichMethodAI-powered analysis of cancer metabolic reprogramming including Warburg effect, glutamine addiction, lipid metabolism, and metabolic vulnerabilities for therapeutic targeting.
opentrons-protocol-agent
by FridrichMethodGenerates executable Python protocols for Opentrons OT-2 and Flex robots from natural language descriptions.
opentrons-integration
by FridrichMethodOpentrons Protocol API v2 for OT-2/Flex: Python protocols for pipetting, serial dilutions, PCR, plate replication; control thermocycler, heater-shaker, magnetic, temperature modules. Use pylabrobot for multi-vendor.
molecular-glue-discovery-agent
by FridrichMethodAI-powered molecular glue discovery for targeted protein degradation, enabling neo-substrate recruitment and undruggable target degradation through E3 ligase interface modulation.
claims-appeals
by FridrichMethodClaims Appeals agent for healthcare workflows.
bio-epidemiological-genomics-variant-surveillance
by FridrichMethodAssigns pathogen lineages (SARS-CoV-2 Pangolin via UShER mode; Nextclade clade + QC; pango-designation alias_key.json resolution) and tracks variant frequencies over time using Nextstrain (Augur + Auspice), wastewater deconvolution (Freyja, COJAC, alcov, lineagespot), lineage fitness modelling (Wenseleers / Bedford-Figgins multinomial logistic), and recombinant detection (3SEQ, RDP4, Bolotie). Covers Pangolin pangolin-data version pinning (mandatory for reproducibility), Nextclade dataset versioning (lineage-defining mutations change with dataset), Freyja barcode forward-only date constraint, ARTIC primer scheme version churn (V3 / V4 / V4.1 / V5.3.2 / Midnight 1200) with documented dropout regions, recombinant X-prefix Pango designation lag, GISAID vs INSDC dual-deposition tensions, and the Karthikeyan 2022 wastewater early-detection signal with explicit reproducibility caveats.
bio-comparative-genomics-ancestral-reconstruction
by FridrichMethodReconstruct ancestral sequences at phylogenetic nodes using PAML and IQ-TREE marginal likelihood methods. Infer ancient protein sequences and trace evolutionary trajectories through sequence history. Use when inferring ancestral states for protein resurrection or tracing evolutionary history.
bids
by FridrichMethodUse this skill when working with Brain Imaging Data Structure (BIDS) datasets: organizing neuroscience and biomedical data (MRI, EEG, MEG, iEEG, PET, microscopy, NIRS, motion capture, EMG, MR spectroscopy, behavioral), querying BIDS layouts, validating compliance, converting DICOM to BIDS, writing metadata sidecars, or creating BIDS derivatives.
protein-qc
by FridrichMethodQuality control metrics and filtering thresholds for protein design. Use this skill when: (1) Evaluating design quality for binding, expression, or structure, (2) Setting filtering thresholds for pLDDT, ipTM, PAE, (3) Checking sequence liabilities (cysteines, deamidation, polybasic clusters), (4) Creating multi-stage filtering pipelines, (5) Computing PyRosetta interface metrics (dG, SC, dSASA), (6) Checking biophysical properties (instability, GRAVY, pI), (7) Ranking designs with composite scoring. This skill provides research-backed thresholds from binder design competitions and published benchmarks.
biomaster-workflows
by FridrichMethodPipeline maestro
chatehr-clinician-assistant
by FridrichMethodEHR Chat Assistant
Browse Agent Skills by Occupation
23 major groups · 867 SOC occupations
Browse by Category
Explore agent skills organized by their primary use case
Explore the agent skills ecosystem by occupation and creator
SkillMD is not just a keyword search box. It is an open map that organizes public skills by occupation, creator, and repository, helping you see which workflows, judgment criteria, and domain habits people are writing for AI agents.
Then follow creators and GitHub repositories back to the source: compare the skills a team maintains, whether the repo is active, and how the README frames the work before you open, install, or reuse anything.
Use it three ways: learn an unfamiliar field by occupation, study how creators organize skills, then use source context to decide what is worth opening or reusing.
01 Map a field
Browse 23 occupation groups and 867 SOC roles to learn what skills exist in adjacent domains and how they break down real work.
02 Follow creators
Use creator and repository pages to inspect maintained skill collections, recent updates, and source context before trusting a result.
03 Search with sources
Search 1.7M+ collected skills, then use occupation tags, creators, and GitHub source context to decide what is worth opening.
Start with the occupation map, then follow creators and repositories back to real code. SkillMD helps explain why a skill is worth opening, not only what it is named.
Standardizing Agent Capabilities with SKILL.md and Model Context Protocol (MCP)
In the rapidly evolving landscape of artificial intelligence, LLM agents (Large Language Model agents) have transitioned from simple text predictors to autonomous problem solvers. To orchestrate complex, multi-step agentic workflows, developers require a standardized format to specify agent capabilities, prompt instructions, system rules, and database bindings. This is where SKILL.md and the Model Context Protocol (MCP) have emerged as standard developer paradigms. SkillMD serves as the central directory for indexing, exploring, and sharing these critical agent configurations.
Our open-source registry currently tracks over 1.7 million collected SKILL.md configurations and system prompts. By compiling agent configurations from active developers on GitHub, we bridge the gap between prompt engineering research and production execution. Whether you are building agents with Anthropic's Claude Code, OpenAI's GPT-4, Google's Gemini, or local models using Ollama and LlamaIndex, standardized skill definitions ensure your agents behave predictably across different runtime environments.
What is the Model Context Protocol (MCP)?
The Model Context Protocol (MCP) is an open-source standard designed to connect LLMs to data sources, developer tools, and external environments. MCP establishes a bidirectional communication channel between client applications (like Cursor, Claude Desktop, or custom agent systems) and servers hosting data or capabilities. Standardizing instructions via SKILL.md enables LLMs to query databases, read local files, execute terminal commands, and integrate third-party APIs. SkillMD allows you to find ready-to-run MCP servers and prompt instructions for various occupations and technical tasks.
The Structure of a Professional SKILL.md File
A valid SKILL.md configuration is designed to be easily read by humans and parsed by LLMs. It contains precise system instructions, trigger conditions, required parameters, and execution examples. Below is the typical architectural blueprint of a professional agent skill:
- Metadata & Core Scope: Declares the name of the skill, author details, target models, and a description of the capability.
- Triggers & Intent Detection: Details semantic triggers that help the agent decide when to invoke this skill.
- System Prompts: Explicit system-level instructions that direct the agent's behavior, personality, safety guardrails, and formatting preferences.
- Capabilities & Tools: Lists the files, databases, or APIs the agent must access to complete the tasks.
- Few-Shot Examples: Demonstrates real inputs and outputs, helping the model generalize behavior through in-context learning.
Optimizing Agent Workflows for Modern LLMs
Writing effective agent skills requires deep knowledge of prompt engineering. With the release of advanced reasoning models like Claude 3.5 Sonnet, ChatGPT o1, and DeepSeek-V3, prompt templates must focus on structured thinking. Developers are encouraged to use XML tags (e.g., <thought>, <context>, and <rules>) to isolate execution boundaries. Standardized prompts prevent agents from suffering from context drift, ensuring that long-running tasks remain aligned with the initial system parameters.
Exploring by SOC Occupations and Creator Profiles
What makes SkillMD unique is its taxonomy. Instead of simple text search, we parse and organize files according to the Standard Occupational Classification (SOC) system. This means you can discover skills written for Computer and Mathematical roles, Business and Financial operations, Legal, Design, and and Educational Instruction fields. By tracking creator profiles, developers can study how different teams organize their custom instructions, compare version updates, and fork public configs for specialized enterprise use cases.
SkillMD operates as a high-performance index running on a fast Go backend and a highly responsive Astro SSR frontend. All search queries execute in milliseconds, featuring smart debouncing to prevent multiple API requests while keeping user data secure. Join our community of developers to standardize your AI agent instructions and optimize your LLM prompting workflows today.
Frequently Asked Questions
A practical guide to agent skills: what they are, how to inspect them, and how SkillMD helps you explore the ecosystem.